BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034E10SP1|AL429920
(823 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig445 1549 0.0
>3x_Contig445
Length = 1719
Score = 1549 bits (772), Expect = 0.0
Identities = 805/825 (97%), Gaps = 2/825 (0%)
Strand = Plus / Minus
Query: 1 gtacaattactcgagggaagcacgcctcctcagtatacctcgatgattataaccagtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 gtacaattactcgagggaagcacgcctcctcagtatacctcgatgattataaccagtaaa 873
Query: 61 ggcagttttctatggtacgtgaacggaacaacgccagamagctacaattcctctctaaca 120
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 872 ggcagtattctatggtacgtgaacggaacaacgccagaaagctacaattcctctctaaca 813
Query: 121 aaccttaamatgatggccttgttgatcaaggataaatggtgcgaagaccaagatttaacg 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 aaccttaaaatgatggccttgttgatcaaggataaatggtgcgaagaccaagatttaacg 753
Query: 181 gccactgatacaattcaccattttgaactggaagatctacatatagcactggcaagaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gccactgatacaattcaccattttgaactggaagatctacatatagcactggcaagaatc 693
Query: 241 cctgatagtgaacttttgctagttcttattgctggaaatgagtttccaaacgggcttttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 cctgatagtgaacttttgctagttcttattgctggaaatgagtttccaaacgggcttttg 633
Query: 301 ggactgamattaamatacgctttgccagcattccatgatttaamaggatacaaactttca 360
||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 632 ggactgaaattaaaatacgctttgccagcattccatgatttaaaaggatacaaactttca 573
Query: 361 agctaattgatactacaaggtgttattatactcacttcgcatagagaaaatagatgatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agctaattgatactacaaggtgttattatactcacttcgcatagagaaaatagatgatgt 513
Query: 421 actccatgtaacgatatatatatmtctccmgttattgaatgagatatgcatagatggtgc 480
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 512 actccatgtaacgatatatatatatctccagttattgaatgagatatgcatagatggtgc 453
Query: 481 tttaccctaatgaactgtgttacccggatactattcgamataaattcgcgaaamttgaca 540
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 452 tttaccctaatgaactgtgttacccggatactattcgaaataaattcgcgaaaattgaca 393
Query: 541 aggcctttmamattgtatggaaaatatgattgcctaaacattatatgctttatttmacgt 600
|||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 392 aggcctttaaaattgtatggaaaatatgattgcctaaacattatatgctttatttaacgt 333
Query: 601 gatgctattcgattggmttttmaaagctaagtaggtcaagaccaggactgctgagcgctg 660
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gatgctattcgattggattttaaaagctaagtaggtcaagaccaggactgctgagcgctg 273
Query: 661 gcttattgaagcgtaacttcaagtggaatagccatttctggaagcacctttgaaagcga- 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gcttattgaagcgtaacttcaagtggaatagccatttctggaagcacctttgaaagcgaa 213
Query: 720 -gsttctataggctcttccatcaaaaattctgcgaattgaatccgttcgcttgattcacc 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gcgatctataggctcttccatcaaaaattctgcgaattgaatccgttcgcttgattcacc 153
Query: 779 aatattattctgcatacaacatacctttttaattcacaaaaatta 823
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aatattattctgcatacaacatacctttttaattcacaaaaatta 108
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4607
Number of Sequences: 1807
Number of extensions: 4607
Number of successful extensions: 106
Number of sequences better than 1.0e-20: 1
length of query: 823
length of database: 10,358,551
effective HSP length: 16
effective length of query: 807
effective length of database: 10,329,639
effective search space: 8336018673
effective search space used: 8336018673
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)